wwpdb.org is a domain
that was created on 2003-08-11,making it 22 years ago.
It has several subdomains, such as sf-tool.wwpdb.org
mmcif.wwpdb.org , among others.
Description:wwPDB: Worldwide Protein Data...
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| Celebrating 50 Years of the Protein Data Bank Archive https://www.wwpdb.org/pdb50 |
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Toggle navigation Validation Validation Reports Validation Servers OneDep Validation API Deposition Deposit Structure System Information Tutorial FAQ All Deposition Resources Dictionaries PDBx/mmCIF Chemical Component Dictionary Biologically Interesting Molecule Reference Dictionary (BIRD) Documentation Extended PDB ID With 12 Characters File Format Deposition & Biocuration Remediation Instructions to Journals Task Forces Validation Task Forces X-Ray Validation NMR Validation EM Validation Small Angle Scattering (SAS) PDBx/mmCIF Working Group Hybrid/Integrative Methods ModelCIF Working Group Downloads PDB Archive PDB Versioned Archive PDB NextGen Archive Statistics Deposition Statistics Download Statistics About Contact Us Cite Us Publications Advisory Committee Agreement Outreach FAQ Privacy Usage Policies PDB50 Since 1971, the Protein Data Bank archive (PDB) has served as the single repository of information about the 3D structures of proteins, nucleic acids, and complex assemblies. Celebrating 50 Years of the PDB The Worldwide PDB (wwPDB) organization manages the PDB archive and ensures that the PDB is freely and publicly available to the global community. Celebrating 20 Years of the wwPDB Partnership Validate Structure or View validation reports Deposit Structure All Deposition Resources Download Archive Instructions Vision and Mission Vision Sustain freely accessible, interoperating Core Archives of structure data and metadata for biological macromolecules as an enduring public good to promote basic and applied research and education across the sciences. Mission Manage the wwPDB Core Archives as a public good according to the FAIR Principles. Provide expert deposition, validation, biocuration, and remediation services at no charge to Data Depositors worldwide. Ensure universal open access to public domain structural biology data with no limitations on usage. Develop and promote community-endorsed data standards for archiving and exchange of global structural biology data. wwPDB Members wwPDB data centers serve as deposition, annotation, and distribution sites of the PDB archive. Each site offers tools for searching, visualizing, and analyzing PDB data. PDBj Protein Data Bank Japan Protein Data Bank Japan Supports browsing in multiple languages such as Japanese, Chinese, and Korean; SeSAW identifies functionally or evolutionarily conserved motifs by locating and annotating sequence and structural similarities, tools for bioinformaticians, and more. RCSB PDB Research Collaboratory for Structural Bioinformatics Protein Data Bank Research Collaboratory for Structural Bioinformatics Protein Data Bank Simple and advanced searching for macromolecules and ligands, flexible APIs for programmatic users, specialized 1D-3D visualization tools, Molecule of the Month and other training resources at PDB-101, and more. BMRB Biological Magnetic Resonance Data Bank Collects NMR data from any experiment and captures assigned chemical shifts, coupling constants, and peak lists for a variety of macromolecules; contains derived annotations such as hydrogen exchange rates, pKa values, and relaxation parameters. PDBe Protein Data Bank in Europe Protein Data Bank in Europe Rich information about all PDB entries, multiple search and browse facilities, advanced services including PDBePISA, PDBeFold and PDBeMotif, advanced visualisation and validation of NMR and EM structures, tools for bioinformaticians. EMDB Protein Data Bank in Europe Electron Microscopy Data Bank Collects 3D volumes & associated information of macromolecular complexes & subcellular structures from electron cryo microscopy & electron cryo tomography; develops resources for searching, data mining, analyzing, validating & visualizing data. wwPDB Resources Data Dictionaries Macromolecular Dictionary (PDBx/mmCIF) Small Molecule Dictionary (CCD) Peptide-like antibiotic and inhibitor molecules (BIRD) Biocuration Procedures and policies Improvements for consistency and accuracy Community Input: Task Forces and Working Groups Validation Task Forces (X-ray, NMR, 3DEM) Small Angle Scattering Task Force PDBx/mmCIF Working Group Hybrid/Integrative Methods Task Force Ligand Validation Workshop ModelCIF Working Group PDB Data Growth & Usage Statistics Depositions: by data center, by year, and by depositor location Downloads: by year for all entries Workshops & Symposia 2021: Celebrating 50 Years of the PDB Summaries and presentations from past meetings and events Information for Journals Policies, procedures, coordination with publishers, and preferred Instructions to Authors Cite wwPDB: Nature Structural Biology 10 , 980 (2003) doi: 10.1038/nsb1203-980 Cite the PDB archive: Nucleic Acids Research (2019), doi: 10.1093/nar/gky949 More publications News & Announcements 05/08/2024 Poster Prize Awarded at DiscoverBMB The wwPDB Foundation awarded Angela Kayll (James Madison University) for her poster Solution Structure of the hMDH2-hCS Metabolon . Read more 05/07/2024 Celia Schiffer Elected to National Academy of Sciences Schiffer is Chair of the wwPDB Foundation Read more 04/30/2024 Coming soon: Annotation of Protein Modifications in the PDB By the end of 2024, wwPDB will roll out updated atomic coordinate files as well as updated CCD files containing additional annotation describing protein chemical modifications (PCMs) and post translational modifications (PTMs) Read more All News News & Announcements Community Bulletin Board Download Archive RCSB PDB | PDBe | PDBj Instructions Archive Snapshots RCSB PDB (https) | RCSB PDB (FTP) | PDBjCite wwPDB: Nature Structural Biology 10 , 980 (2003) doi: 10.1038/nsb1203-980 More publications wwPDB Members: ©...
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